Nextflow pipelines
Build and run Nextflow workflows.
Research
PyTorch Lightning
Train models with PyTorch Lightning.
Scientific database lookup
Look up records in scientific databases.
Scientific skills (collection)
A large collection of scientific agent skills across bioinformatics, chemistry, clinical research, machine learning and more.
Bulk RNA-seq analysis
Analyse bulk RNA sequencing data.
Scanpy
Single-cell analysis with Scanpy.
RDKit
Cheminformatics with RDKit.
PyDESeq2
Differential expression analysis with PyDESeq2.
Scientific writing
Write scientific papers and reports.
Geospatial analysis
Work with geospatial data.
Clinical reports
Draft clinical and medical reports.
Primary-source research
Investigate questions against primary sources.
Research report builder
Builds a sourced research report: question, sources, notes, synthesis, draft and fact-check.
Market sizer
Estimates market size with clear assumptions from top-down and bottom-up methods. Use for business cases.
User research synthesizer
Synthesises interviews and feedback into themes and insights with quotes. Use after research.
Literature review outline
Builds a literature review outline from sources: themes, debates, methods and gaps. Use for papers and reports.
Interview guide writer
Writes a user or customer interview guide: goals, warm-up, open questions, probes and wrap-up. Use before research sessions.
User research synthesis
Turns interview notes into themes, insights and recommendations with supporting quotes. Use after research sessions.
Source credibility check
Checks how trustworthy a source is: author, evidence, bias, date and corroboration. Use before relying on a claim.
Research assistant
Researches a question across given sources and the web, then reports findings with citations. Use for fact-finding.
Research summary
Summarises sources into findings with citations, agreement and disagreement, and gaps. Use when asked to research a topic from given material.
Fact check claims
Checks claims in a text one by one, rating each as supported, unsupported or false with evidence. Use before publishing.
Compare options
Compares two or more options against criteria that matter and recommends one, with reasons. Use for tool, vendor or approach decisions.